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fix invalid rapid qos selection
it only applies to the c partition
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@ -11,7 +11,7 @@ process {
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module = 'anaconda3/2019.10'
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// --signal option will be handled by nextflow after 21.10.0 release (see https://github.com/nextflow-io/nextflow/issues/2163)
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clusterOptions = { '--signal B:USR2 ' << ( task.time <= 1.h ? '--qos rapid' : ( task.time <= 8.h ? '--qos short': ( task.time <= 48.h ? '--qos medium' : '--qos long' ) ) ) }
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clusterOptions = { '--signal B:USR2 ' << ( (queue == 'c' & task.time <= 1.h) ? '--qos rapid' : ( task.time <= 8.h ? '--qos short': ( task.time <= 48.h ? '--qos medium' : '--qos long' ) ) ) }
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}
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singularity {
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