1
0
Fork 0
mirror of https://github.com/MillironX/nf-configs.git synced 2024-12-25 11:38:18 +00:00

Set BLASTDB_LMDB_MAP_SIZE

This environment variable needs to be set in order to prevent memory allocation errors in the MAKEBLASTDB process.
This commit is contained in:
ameynert 2021-07-22 15:07:19 +01:00 committed by GitHub
parent 17fad9dd15
commit 2112168420
No known key found for this signature in database
GPG key ID: 4AEE18F83AFDEB23

View file

@ -1,3 +1,7 @@
env {
BLASTDB_LMDB_MAP_SIZE=100000000
}
process {
withName : '.*PICARD.*' {
clusterOptions = {"-l h_vmem=${(task.memory + 4.GB).bytes/task.cpus}"}