mirror of
https://github.com/MillironX/nf-configs.git
synced 2024-11-10 20:13:09 +00:00
modified mpcdf configs (general + eager)
This commit is contained in:
parent
341ea3664e
commit
25c644abb7
2 changed files with 57 additions and 2 deletions
|
@ -47,7 +47,7 @@ profiles {
|
|||
}
|
||||
|
||||
executor {
|
||||
queueSize = 8
|
||||
queueSize = 72
|
||||
pollInterval = '1 min'
|
||||
queueStatInterval = '5 min'
|
||||
}
|
||||
|
@ -61,7 +61,7 @@ profiles {
|
|||
|
||||
params {
|
||||
config_profile_description = 'MPCDF raven profile (unofficially) provided by nf-core/configs.'
|
||||
max_memory = 368.GB
|
||||
max_memory = 2048.GB
|
||||
max_cpus = 72
|
||||
max_time = 24.h
|
||||
}
|
||||
|
|
|
@ -61,4 +61,59 @@ process {
|
|||
}
|
||||
}
|
||||
}
|
||||
raven {
|
||||
// Specific nf-core/eager process configuration
|
||||
process {
|
||||
|
||||
withName: malt {
|
||||
maxRetries = 1
|
||||
memory = 2048.GB
|
||||
cpus = 72
|
||||
time = 24.h
|
||||
}
|
||||
|
||||
withLabel:'sc_tiny'{
|
||||
cpus = { check_max( 1, 'cpus' ) }
|
||||
memory = { check_max( 1.GB * task.attempt, 'memory' ) }
|
||||
time = 24.h
|
||||
}
|
||||
|
||||
withLabel:'sc_small'{
|
||||
cpus = { check_max( 1, 'cpus' ) }
|
||||
memory = { check_max( 4.GB * task.attempt, 'memory' ) }
|
||||
time = 24.h
|
||||
}
|
||||
|
||||
withLabel:'sc_medium'{
|
||||
cpus = { check_max( 1, 'cpus' ) }
|
||||
memory = { check_max( 8.GB * task.attempt, 'memory' ) }
|
||||
time = 24.h
|
||||
}
|
||||
|
||||
withLabel:'mc_small'{
|
||||
cpus = { check_max( 2 * task.attempt, 'cpus' ) }
|
||||
memory = { check_max( 4.GB * task.attempt, 'memory' ) }
|
||||
time = 24.h
|
||||
}
|
||||
|
||||
withLabel:'mc_medium' {
|
||||
cpus = { check_max( 4 * task.attempt, 'cpus' ) }
|
||||
memory = { check_max( 8.GB * task.attempt, 'memory' ) }
|
||||
time = 24.h
|
||||
}
|
||||
|
||||
withLabel:'mc_large'{
|
||||
cpus = { check_max( 8 * task.attempt, 'cpus' ) }
|
||||
memory = { check_max( 16.GB * task.attempt, 'memory' ) }
|
||||
time = 24.h
|
||||
}
|
||||
|
||||
withLabel:'mc_huge'{
|
||||
cpus = { check_max( 72, 'cpus' ) }
|
||||
memory = { check_max( 240.GB * task.attempt, 'memory' ) }
|
||||
time = 24.h
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
}
|
||||
|
|
Loading…
Reference in a new issue