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modified mpcdf configs (general + eager)
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341ea3664e
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2 changed files with 57 additions and 2 deletions
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@ -47,7 +47,7 @@ profiles {
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}
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executor {
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queueSize = 8
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queueSize = 72
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pollInterval = '1 min'
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queueStatInterval = '5 min'
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}
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@ -61,7 +61,7 @@ profiles {
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params {
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config_profile_description = 'MPCDF raven profile (unofficially) provided by nf-core/configs.'
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max_memory = 368.GB
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max_memory = 2048.GB
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max_cpus = 72
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max_time = 24.h
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}
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@ -61,4 +61,59 @@ process {
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}
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}
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}
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raven {
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// Specific nf-core/eager process configuration
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process {
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withName: malt {
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maxRetries = 1
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memory = 2048.GB
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cpus = 72
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time = 24.h
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}
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withLabel:'sc_tiny'{
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cpus = { check_max( 1, 'cpus' ) }
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memory = { check_max( 1.GB * task.attempt, 'memory' ) }
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time = 24.h
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}
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withLabel:'sc_small'{
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cpus = { check_max( 1, 'cpus' ) }
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memory = { check_max( 4.GB * task.attempt, 'memory' ) }
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time = 24.h
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}
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withLabel:'sc_medium'{
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cpus = { check_max( 1, 'cpus' ) }
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memory = { check_max( 8.GB * task.attempt, 'memory' ) }
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time = 24.h
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}
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withLabel:'mc_small'{
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cpus = { check_max( 2 * task.attempt, 'cpus' ) }
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memory = { check_max( 4.GB * task.attempt, 'memory' ) }
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time = 24.h
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}
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withLabel:'mc_medium' {
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cpus = { check_max( 4 * task.attempt, 'cpus' ) }
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memory = { check_max( 8.GB * task.attempt, 'memory' ) }
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time = 24.h
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}
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withLabel:'mc_large'{
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cpus = { check_max( 8 * task.attempt, 'cpus' ) }
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memory = { check_max( 16.GB * task.attempt, 'memory' ) }
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time = 24.h
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}
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withLabel:'mc_huge'{
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cpus = { check_max( 72, 'cpus' ) }
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memory = { check_max( 240.GB * task.attempt, 'memory' ) }
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time = 24.h
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}
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}
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}
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}
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