diff --git a/conf/jax.config b/conf/jax.config index a5437e9..7cf790e 100644 --- a/conf/jax.config +++ b/conf/jax.config @@ -2,6 +2,7 @@ params { config_profile_description = 'The Jackson Laboratory Sumner HPC profile provided by nf-core/configs.' config_profile_contact = 'Asaf Peer (@peera)' config_profile_url = 'https://jacksonlaboratory.sharepoint.com/sites/ResearchIT/SitePages/Welcome-to-Sumner.aspx' + singularity_cache_dir = '/fastscratch/singularity_cache_nfcore' } executor.$slurm.queueSize = 250 @@ -12,8 +13,11 @@ process { module = "slurm" beforeScript = 'module load singularity' } -singularity.enabled = true -singularity.autoMounts = true +singularity{ + enabled = true + autoMounts = true + cacheDir = params.singularity_cache_dir +} params { max_memory = 768.GB max_cpus = 70