From 26d164ca74ccc25ba7ee1e6e8fb9843ee7563f65 Mon Sep 17 00:00:00 2001 From: "James A. Fellows Yates" Date: Thu, 21 Jan 2021 13:15:08 +0100 Subject: [PATCH] Remove ceh profile for now --- conf/seg_globe.config | 53 ++++++++++++++++++++----------------------- 1 file changed, 24 insertions(+), 29 deletions(-) diff --git a/conf/seg_globe.config b/conf/seg_globe.config index 390d0ef..41a3d6e 100644 --- a/conf/seg_globe.config +++ b/conf/seg_globe.config @@ -1,32 +1,27 @@ //Profile config names for nf-core/configs - params { - config_profile_description = 'Section for Evolutionary Genomics @ GLOBE, University of Copenhagen - seg_globe profile provided by nf-core/configs.' - config_profile_contact = 'Aashild Vaagene (@ashildv)' - config_profile_url = 'https://globe.ku.dk/research/evogenomics/' - } +params { + config_profile_description = 'Section for Evolutionary Genomics @ GLOBE, University of Copenhagen - seg_globe profile provided by nf-core/configs.' + config_profile_contact = 'Aashild Vaagene (@ashildv)' + config_profile_url = 'https://globe.ku.dk/research/evogenomics/' + max_memory = 250.GB + max_cpus = 35 + max_time = 720.h +} -profiles { -ceh { - singularity { - enabled = true - autoMounts = true - cacheDir = '/shared/volume/hologenomics/data/cache/nf-eager/singularity' - } - process { - executor = 'slurm' - queue = { task.time < 24.h ? 'hologenomics-short' : task.time < 168.h ? 'hologenomics' : 'hologenomics-long' } - } +singularity { + enabled = true + autoMounts = true + cacheDir = '/shared/volume/hologenomics/data/cache/nf-eager/singularity' +} + +process { + executor = 'slurm' + queue = { task.time < 24.h ? 'hologenomics-short' : task.time < 168.h ? 'hologenomics' : 'hologenomics-long' } +} - cleanup = true - - executor { - queueSize = 8 - } - params { - max_memory = 250.GB - max_cpus = 35 - max_time = 720.h - } - } - } - +cleanup = true + +executor { + queueSize = 8 +} +