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Remove ceh profile for now

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James A. Fellows Yates 2021-01-21 13:15:08 +01:00 committed by GitHub
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1 changed files with 24 additions and 29 deletions
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conf/seg_globe.config
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@ -1,32 +1,27 @@
//Profile config names for nf-core/configs //Profile config names for nf-core/configs
params { params {
config_profile_description = 'Section for Evolutionary Genomics @ GLOBE, University of Copenhagen - seg_globe profile provided by nf-core/configs.' config_profile_description = 'Section for Evolutionary Genomics @ GLOBE, University of Copenhagen - seg_globe profile provided by nf-core/configs.'
config_profile_contact = 'Aashild Vaagene (@ashildv)' config_profile_contact = 'Aashild Vaagene (@ashildv)'
config_profile_url = 'https://globe.ku.dk/research/evogenomics/' config_profile_url = 'https://globe.ku.dk/research/evogenomics/'
} max_memory = 250.GB
max_cpus = 35
max_time = 720.h
}
profiles { singularity {
ceh { enabled = true
singularity { autoMounts = true
enabled = true cacheDir = '/shared/volume/hologenomics/data/cache/nf-eager/singularity'
autoMounts = true }
cacheDir = '/shared/volume/hologenomics/data/cache/nf-eager/singularity'
} process {
process { executor = 'slurm'
executor = 'slurm' queue = { task.time < 24.h ? 'hologenomics-short' : task.time < 168.h ? 'hologenomics' : 'hologenomics-long' }
queue = { task.time < 24.h ? 'hologenomics-short' : task.time < 168.h ? 'hologenomics' : 'hologenomics-long' } }
}
cleanup = true cleanup = true
executor { executor {
queueSize = 8 queueSize = 8
} }
params {
max_memory = 250.GB
max_cpus = 35
max_time = 720.h
}
}
}