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Add in both uppmax profiles
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2 changed files with 20 additions and 8 deletions
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/*
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* -------------------------------------------------
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* Nextflow config file for UPPMAX (rackham / irma)
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* -------------------------------------------------
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//Profile config names for nf-core/configs
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params {
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config_profile_name = 'UPPMAX-DEVEL'
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config_profile_description = 'UPPMAX Development Cluster Profile provided by nf-core/configs.'
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config_profile_contact = 'Phil Ewels (@ewels)'
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config_profile_url = 'https://www.uppmax.uu.se/'
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}
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/* Additional description:
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* To be applied after main UPPMAX config, overwrites config and
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* submits jobs to the `devcore` queue, which has much faster
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* queue times. All jobs are limited to 1 hour to be eligible
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* for this queue and only one job allowed at a time.
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*/
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executor {
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name = 'slurm'
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queueSize = 1
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/*
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* -------------------------------------------------
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* Nextflow config file for UPPMAX (rackham / irma)
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* -------------------------------------------------
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//Profile config names for nf-core/configs
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params {
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config_profile_name = 'UPPMAX'
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config_profile_description = 'UPPMAX Cluster Profile provided by nf-core/configs.'
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config_profile_contact = 'Phil Ewels (@ewels)'
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config_profile_url = 'https://www.uppmax.uu.se/'
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}
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/* Additional description:
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* Defines reference genomes, using iGenome paths
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* Imported under the default 'standard' Nextflow
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* profile in nextflow.config
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