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Merge pull request #156 from piotr-faba-ardigen/add_bi_config

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Add bi config
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Alexander Peltzer 2020-05-27 21:03:15 +02:00 committed by GitHub
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1 changed files with 3 additions and 1 deletions
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4
conf/bi.config
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@ -10,7 +10,9 @@ includeConfig params.globalConfig
def determine_global_config() { def determine_global_config() {
if( System.getenv('NXF_GLOBAL_CONFIG') == null) if( System.getenv('NXF_GLOBAL_CONFIG') == null)
{ {
throw new Exception("Environment variable NXF_GLOBAL_CONFIG is missing. Set it to point to global.config file") def errorMessage = "ERROR: Environment variable NXF_GLOBAL_CONFIG is missing. Set it to point to global.config file."
System.err.println(errorMessage)
throw new Exception(errorMessage)
} }
return System.getenv('NXF_GLOBAL_CONFIG') return System.getenv('NXF_GLOBAL_CONFIG')
} }