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Update uppmax.config

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Maxime Garcia 2020-04-09 11:35:37 +02:00 committed by GitHub
parent d1ff87a416
commit 34dc18faf6
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4
conf/pipeline/sarek/uppmax.config
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@ -9,9 +9,13 @@ params {
igenomeIgnore = true
genomes_base = params.genome == 'GRCh37' ? '/sw/data/uppnex/ToolBox/ReferenceAssemblies/hg38make/bundle/2.8/b37' : '/sw/data/uppnex/ToolBox/hg38bundle'
}
def hostname = "hostname".execute().text.trim()
if (hostname ==~ "r.*") {
params.singleCPUmem = 6400.MB
}
if (hostname ==~ "i.*") {
params.singleCPUmem = 15.GB
}