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Åshild J. Vågene 2022-06-03 17:08:15 +02:00 committed by GitHub
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docs/mjolnir_globe.md
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@ -4,7 +4,7 @@
Prior to running the pipeline for the first time with the `mjolnir_globe.config` (../conf/mjolnir_globe.config), users **must** create a hidden directory called `.tmp_nfcore` in their data/project directory on Mjolnir where the temp files from nf-core pipelines will be re-directed by the `NXF_TEMP` command (see below).
The contents of the `.tmp_nfcore` directory should be periodically deleted manually to save on space.
The contents of the `.tmp_nfcore` directory should be periodically deleted manually to save on space.
If the `NXF_TEMP` command is not used to properly re-direct temp files the `/tmp` directory on the compute nodes will be used and quickly filled up, which blocks anyone from working on these nodes until the offending user removes their files.
The following lines **must** be added by users to their `~/.bash_profile`: