From 3ad0003979a4d7c598be03980d1640c9327a8478 Mon Sep 17 00:00:00 2001 From: Piotr Faba Date: Wed, 27 May 2020 16:46:08 +0200 Subject: [PATCH] test without dummy config --- .github/workflows/main.yml | 3 +-- 1 file changed, 1 insertion(+), 2 deletions(-) diff --git a/.github/workflows/main.yml b/.github/workflows/main.yml index c906cf9..0742e5c 100644 --- a/.github/workflows/main.yml +++ b/.github/workflows/main.yml @@ -23,9 +23,8 @@ jobs: run: | wget -qO- get.nextflow.io | bash sudo mv nextflow /usr/local/bin/ - touch /home/runner/dummy.config - name: Check ${{ matrix.profile }} profile env: SCRATCH: '~' - NXF_GLOBAL_CONFIG: /home/runner/dummy.config + NXF_GLOBAL_CONFIG: ${GITHUB_WORKSPACE}/config/awsbatch.config run: nextflow run ${GITHUB_WORKSPACE}/configtest.nf --custom_config_base=${GITHUB_WORKSPACE} -profile ${{ matrix.profile }}