From 3ce32f50c45b44ca1226f1a60b6cf821a26315df Mon Sep 17 00:00:00 2001 From: Combiz Khozoie <31043044+combiz@users.noreply.github.com> Date: Fri, 11 Feb 2022 11:02:40 +0000 Subject: [PATCH] Update imperial.config Moved params configs from internal profile to universal --- conf/imperial.config | 36 ++++++++++++------------------------ 1 file changed, 12 insertions(+), 24 deletions(-) diff --git a/conf/imperial.config b/conf/imperial.config index 9f560e0..729d623 100644 --- a/conf/imperial.config +++ b/conf/imperial.config @@ -1,19 +1,19 @@ //Profile config names for nf-core/configs +params { + // Config Params + config_profile_description = 'Imperial College London - HPC Profile -- provided by nf-core/configs.' + config_profile_contact = 'Combiz Khozoie (c.khozoie@imperial.ac.uk)' + config_profile_url = 'https://www.imperial.ac.uk/admin-services/ict/self-service/research-support/rcs/' + + // Resources + max_memory = 480.GB + max_cpus = 40 + max_time = 1000.h +} + profiles { imperial { - params { - // Config Params - config_profile_description = 'Imperial College London - HPC Profile -- provided by nf-core/configs.' - config_profile_contact = 'Combiz Khozoie (c.khozoie@imperial.ac.uk)' - config_profile_url = 'https://www.imperial.ac.uk/admin-services/ict/self-service/research-support/rcs/' - - // Resources - max_memory = 480.GB - max_cpus = 40 - max_time = 1000.h - } - process { executor = 'pbspro' @@ -51,18 +51,6 @@ profiles { } } medbio { - params { - // Config Params - config_profile_description = 'Imperial College London - MEDBIO QUEUE - HPC Profile -- provided by nf-core/configs.' - config_profile_contact = 'Combiz Khozoie (c.khozoie@imperial.ac.uk)' - config_profile_url = 'https://www.imperial.ac.uk/bioinformatics-data-science-group/resources/uk-med-bio/' - - // Resources - max_memory = 480.GB - max_cpus = 40 - max_time = 1000.h - } - process { executor = 'pbspro'