From 3e22b85b0260465eb3e526e1f97face1c75282d2 Mon Sep 17 00:00:00 2001
From: pierrespc <pierrespc@gmail.com>
Date: Wed, 22 Sep 2021 10:13:46 +0200
Subject: [PATCH] maestro only for normal qos

---
 conf/maestro.config  | 8 ++++----
 nfcore_custom.config | 3 +--
 2 files changed, 5 insertions(+), 6 deletions(-)

diff --git a/conf/maestro.config b/conf/maestro.config
index 42ba030..a3fb7b5 100644
--- a/conf/maestro.config
+++ b/conf/maestro.config
@@ -14,13 +14,13 @@ process {
   executor = 'slurm'
   scratch = false
   queue = 'common'
-  clusterOptions = {task.time < 24.h ? '--qos=normal' : '--qos=long'}
+  clusterOptions = '--qos=normal'
 }
 
 params {
   igenomes_ignore = true
   igenomesIgnore = true
-  max_memory = {task.time < 24.h ? 400.GB : 100.GB }
-  max_cpus = {task.time < 24.h ? 96 : 5 }
-  max_time = {task.time < 24.h ? 24.h : 8760.h }
+  max_memory = 400.GB
+  max_cpus = 96
+  max_time = 24.h
 }
diff --git a/nfcore_custom.config b/nfcore_custom.config
index 3e41ce8..c7dcbf4 100644
--- a/nfcore_custom.config
+++ b/nfcore_custom.config
@@ -41,13 +41,12 @@ profiles {
   imperial_mb  { includeConfig "${params.custom_config_base}/conf/imperial_mb.config" }  
   jax          { includeConfig "${params.custom_config_base}/conf/jax.config" }
   lugh         { includeConfig "${params.custom_config_base}/conf/lugh.config" }
+  maestro      { includeConfig "${params.custom_config_base}/conf/maestro.config" }
   mpcdf        { includeConfig "${params.custom_config_base}/conf/mpcdf.config" }
   munin        { includeConfig "${params.custom_config_base}/conf/munin.config" }
   nu_genomics  { includeConfig "${params.custom_config_base}/conf/nu_genomics.config" }
   oist         { includeConfig "${params.custom_config_base}/conf/oist.config" }
   pasteur      { includeConfig "${params.custom_config_base}/conf/pasteur.config" }
-  pasteurNorm  { includeConfig "${params.custom_config_base}/conf/pasteurMaestroNormal.config" }
-  pasteurLong  { includeConfig "${params.custom_config_base}/conf/pasteurMaestroLong.config" }
   phoenix      { includeConfig "${params.custom_config_base}/conf/phoenix.config" }
   prince       { includeConfig "${params.custom_config_base}/conf/prince.config" }
   sanger       { includeConfig "${params.custom_config_base}/conf/sanger.config"}