diff --git a/.github/workflows/main.yml b/.github/workflows/main.yml index 22a3655..7b20832 100644 --- a/.github/workflows/main.yml +++ b/.github/workflows/main.yml @@ -14,10 +14,10 @@ jobs: matrix: profile: ['awsbatch, bigpurple, binac, cbe, ccga_dx, ccga, cfc, crick, czbiohub_aws_highpriority, czbiohub_aws, denbi_qbic, genouest, gis, hebbe, kraken, munin, pasteur, phoenix, prince, shh, uct_hex, uppmax_devel, uppmax, uzh'] steps: - - uses: actions/checkout@v1 - - name: Install Nextflow - run: | + - uses: actions/checkout@v1 + - name: Install Nextflow + run: | wget -qO- get.nextflow.io | bash sudo mv nextflow /usr/local/bin/ - - name: "Check profile" - run: nextflow run ${GITHUB_WORKSPACE}/configtest.nf --custom_config_base=${GITHUB_WORKSPACE} -profile ${{ matrix.profile }} \ No newline at end of file + - name: "Check profile" + run: nextflow run ${GITHUB_WORKSPACE}/configtest.nf --custom_config_base=${GITHUB_WORKSPACE} -profile ${{ matrix.profile }} \ No newline at end of file