diff --git a/conf/pipeline/raredisease/hasta.config b/conf/pipeline/raredisease/hasta.config index 1359522..fb4d94a 100644 --- a/conf/pipeline/raredisease/hasta.config +++ b/conf/pipeline/raredisease/hasta.config @@ -8,10 +8,7 @@ process { memory = { check_max( 80.GB * task.attempt, 'memory' ) } } withLabel:'sentieon' { - beforeScript = { [ - "export SENTIEON_LICENSE=\$(echo -e \$SENTIEON_LICENSE_BASE64 | base64 -d)", - "export PATH=\$PATH:\$SENTIEON_INSTALL_DIR/sentieon-genomics-202010.02/bin" - ].join(";") } + beforeScript = { "export PATH=\$PATH:\$SENTIEON_INSTALL_DIR/sentieon-genomics-202010.02/bin" } } withName: BCFTOOLS_VIEW { if (params.genome == 'GRCh37') {