From 42a1a159700c0ca5b551ccd97a9126ad0f767f2e Mon Sep 17 00:00:00 2001
From: "James A. Fellows Yates" <jfy133@gmail.com>
Date: Thu, 3 Sep 2020 20:11:56 +0200
Subject: [PATCH] Create mpcdf.config

---
 conf/mpcdf.config | 30 ++++++++++++++++++++++++++++++
 1 file changed, 30 insertions(+)
 create mode 100644 conf/mpcdf.config

diff --git a/conf/mpcdf.config b/conf/mpcdf.config
new file mode 100644
index 0000000..9a109b0
--- /dev/null
+++ b/conf/mpcdf.config
@@ -0,0 +1,30 @@
+params {
+  config_profile_description = 'MPCDF HPC profiles provided by nf-core/configs.'
+  config_profile_contact = 'James Fellows Yates (@jfy133)'
+  config_profile_url = 'https://www.mpcdf.mpg.de/services/computing'
+}
+
+
+profiles {
+    cobra {
+        // Does not have singularity! Conda module must be used, but it is
+        // recommended to set NXF_CONDA_CACHEDIR var in ~/.bash{_profile,rc}
+        // To create common cache dir (only until /u/ periodically cleared!) 
+    
+        process {
+            beforeScript = 'module load anaconda/3/2020.02'
+            executor = 'slurm'
+        }
+       
+        executor {
+            queueSize =8
+        }
+       
+        params {
+            config_profile_description = 'MPCDF cobra profile provided by nf-core/configs.'
+            max_memory = 750.GB
+            max_cpus = 80
+            max_time = 24.h
+        }
+    }
+}