From 42ed4b9da411938d63863883073c49e5a5e86cd7 Mon Sep 17 00:00:00 2001
From: Alexander Peltzer <alex.peltzer@gmail.com>
Date: Tue, 27 Nov 2018 00:02:40 +0100
Subject: [PATCH] Add Phoenix configs

---
 conf/phoenix.config | 23 +++++++++++++++++++++++
 1 file changed, 23 insertions(+)
 create mode 100644 conf/phoenix.config

diff --git a/conf/phoenix.config b/conf/phoenix.config
new file mode 100644
index 0000000..f789eff
--- /dev/null
+++ b/conf/phoenix.config
@@ -0,0 +1,23 @@
+/*
+ * ----------------------------------------------------------------------------
+ *  Nextflow config file for use with Singularity on Phoenix Cluster Adelaide
+ * ----------------------------------------------------------------------------
+ * Defines basic usage limits and singularity image id.
+ */
+
+singularity {
+    enabled = true
+    envWhitelist='SINGULARITY_BINDPATH'
+    autoMounts = true
+}
+
+process {
+    beforeScript = 'module load Singularity/2.5.2-GCC-5.4.0-2.26'
+    executor = 'slurm'
+}
+
+params {
+  max_memory = 128.GB
+  max_cpus = 32
+  max_time = 48.h
+}