millironx/nf-configs
1
0
Fork 0
mirror of https://github.com/MillironX/nf-configs.git synced 2024-11-22 00:26:03 +00:00
Code Issues Releases Packages Activity

2 config files for Maestro HPC at Pasteur Institute, Paris

Browse source
This commit is contained in:
pierrespc 2021-09-16 12:40:56 +02:00
parent b8e60c503f
commit 482e7cf8de
2 changed files with 52 additions and 0 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

26
conf/pasteurMaestroLong.config Normal file
View file

@ -0,0 +1,26 @@
params {
config_profile_description = 'Institut Pasteur Maestro cluster profile'
config_profile_contact = 'Pierre Luisi (@pierrespc)'
}
singularity {
enabled = true
autoMounts = true
runOptions = '--home $HOME:/home/$USER --bind /pasteur'
}
process {
executor = 'slurm'
scratch=false
queue = "common"
clusterOptions = "--qos=long"
}
params {
igenomes_ignore = true
igenomesIgnore = true
max_memory = 100.GB
max_cpus = 5
max_time = 8760.h
}

26
conf/pasteurMaestroNormnal.config Normal file
View file

@ -0,0 +1,26 @@
params {
config_profile_description = 'Institut Pasteur Maestro cluster profile'
config_profile_contact = 'Pierre Luisi (@pierrespc)'
}
singularity {
enabled = true
autoMounts = true
runOptions = '--home $HOME:/home/$USER --bind /pasteur'
}
process {
executor = 'slurm'
scratch=false
queue = "common"
clusterOptions = "--qos=normal"
}
params {
igenomes_ignore = true
igenomesIgnore = true
max_memory = 300.GB
max_cpus = 200
max_time = 24.h
}