From 73fcc4495a302c660ce6ebc10ff2a0df752313e9 Mon Sep 17 00:00:00 2001 From: MaxUlysse Date: Wed, 19 May 2021 20:46:52 +0200 Subject: [PATCH 1/2] feat: update owner of profile --- conf/munin.config | 15 +++++++++------ conf/pipeline/sarek/munin.config | 3 ++- 2 files changed, 11 insertions(+), 7 deletions(-) diff --git a/conf/munin.config b/conf/munin.config index 09df9c8..5db483e 100644 --- a/conf/munin.config +++ b/conf/munin.config @@ -2,8 +2,8 @@ params { // Specific nf-core/configs params - config_profile_contact = 'Szilveszter Juhos (@szilvajuhos)' - config_profile_description = 'MUNIN profile provided by nf-core/configs.' + config_profile_contact = 'Maxime Garcia (@maxulysse)' + config_profile_description = 'MUNIN profile provided by nf-core/configs' config_profile_url = 'https://ki.se/forskning/barntumorbanken' // Local AWS iGenomes reference file paths on munin @@ -26,8 +26,11 @@ singularity { } // To use docker, use nextflow run -profile munin,docker -docker { - enabled = false - mountFlags = 'z' - fixOwnership = true +profiles { + docker { + docker { + enabled = false + mountFlags = 'z' + fixOwnership = true + } } diff --git a/conf/pipeline/sarek/munin.config b/conf/pipeline/sarek/munin.config index 039d117..7276a27 100644 --- a/conf/pipeline/sarek/munin.config +++ b/conf/pipeline/sarek/munin.config @@ -2,8 +2,9 @@ params { // Specific nf-core/configs params - config_profile_contact = 'Maxime Garcia (@MaxUlysse)' + config_profile_contact = 'Maxime Garcia (@maxulysse)' config_profile_description = 'nf-core/sarek MUNIN profile provided by nf-core/configs' + config_profile_url = 'https://ki.se/forskning/barntumorbanken' // Specific nf-core/sarek params annotation_cache = true From 05548bdb75beaf1531212086fce90ecbe446a4f8 Mon Sep 17 00:00:00 2001 From: MaxUlysse Date: Thu, 20 May 2021 09:37:48 +0200 Subject: [PATCH 2/2] fix: forgotten } --- conf/munin.config | 1 + 1 file changed, 1 insertion(+) diff --git a/conf/munin.config b/conf/munin.config index 5db483e..3902e29 100644 --- a/conf/munin.config +++ b/conf/munin.config @@ -33,4 +33,5 @@ profiles { mountFlags = 'z' fixOwnership = true } + } }