From 49e756d1bc94d3070c08232233ffc374bcdf5536 Mon Sep 17 00:00:00 2001 From: qlr900 Date: Wed, 6 Jul 2022 12:39:55 +0200 Subject: [PATCH] fix typos --- conf/ku_sund_dangpu.config | 14 ++++++-------- 1 file changed, 6 insertions(+), 8 deletions(-) diff --git a/conf/ku_sund_dangpu.config b/conf/ku_sund_dangpu.config index 442b8af..7712376 100644 --- a/conf/ku_sund_dangpu.config +++ b/conf/ku_sund_dangpu.config @@ -1,9 +1,7 @@ -# change ${abc123} to your KU ID before using this config - params { - config_profile_contact = ‘Adrija Kalvisa ’ - config_profile_description = ‘dangpufl01 configuration’ - config_profile_url = ‘’ + config_profile_contact = 'Adrija Kalvisa ' + config_profile_description = 'dangpufl01 configuration' + config_profile_url = '' // General cpus/memory/time requirements max_cpus = 30 @@ -13,7 +11,7 @@ params { process { - executor = ‘slurm’ + executor = 'slurm' # uncomment specifically for running mnaseseq pipeline: # withName: TrimGalore { @@ -30,6 +28,6 @@ singularity { enabled = true autoMounts = true # set up the cache directory outside the $HOME directory - cacheDir = ‘/projects/dan1/people/${abc123}/cache/singularity-images’ - runOptions = ‘--bind /projects:/projects’ + cacheDir = '/projects/dan1/people/$USER/cache/singularity-images' + runOptions = '--bind /projects:/projects' } \ No newline at end of file