millironx/nf-configs
1
0
Fork 0
mirror of https://github.com/MillironX/nf-configs.git synced 2024-11-22 08:29:54 +00:00
Code Issues Releases Packages Activity

Merge pull request #317 from nf-core/praveenraj2018-patch-1

Browse source 
Added genome parameter
This commit is contained in:
Maxime U. Garcia 2022-02-11 15:33:18 +01:00 committed by GitHub
commit 4a936a685e
No known key found for this signature in database
GPG key ID: 4AEE18F83AFDEB23
1 changed files with 1 additions and 0 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

1
conf/pipeline/rnavar/munin.config
View file

@ -11,6 +11,7 @@ params {
igenomes_ignore = true
// Genome references
genome = 'GRCh38'
fasta = '/data1/references/CTAT_GenomeLib_v37_Mar012021/GRCh38_gencode_v37_CTAT_lib_Mar012021.plug-n-play/ctat_genome_lib_build_dir/ref_genome.fa'
fasta_fai = '/data1/references/CTAT_GenomeLib_v37_Mar012021/GRCh38_gencode_v37_CTAT_lib_Mar012021.plug-n-play/ctat_genome_lib_build_dir/ref_genome.fa.fai'
gtf = '/data1/references/CTAT_GenomeLib_v37_Mar012021/GRCh38_gencode_v37_CTAT_lib_Mar012021.plug-n-play/ctat_genome_lib_build_dir/ref_annot.gtf'