diff --git a/conf/pipeline/viralrecon/eddie.config b/conf/pipeline/viralrecon/eddie.config new file mode 100644 index 0000000..38192ef --- /dev/null +++ b/conf/pipeline/viralrecon/eddie.config @@ -0,0 +1,9 @@ +process { + withName : '.*PICARD.*' { + clusterOptions = {"-l h_vmem=${(task.memory + 4.GB).bytes/task.cpus}"} + } + + withName : '.*SNPEFF.*' { + clusterOptions = {"-l h_vmem=${(task.memory + 4.GB).bytes/task.cpus}"} + } +}