diff --git a/docs/uppmax.md b/docs/uppmax.md index c17063c..621448b 100644 --- a/docs/uppmax.md +++ b/docs/uppmax.md @@ -8,7 +8,7 @@ We have a Slack channel dedicated to UPPMAX users on the nf-core Slack: [https:/ ## Using the UPPMAX config profile -Before running the pipeline you will need to either install Nextflow or load it using the environment module system. +Before running the pipeline you will need to either install Nextflow or load it using the environment module system (this can be done with e.g. `module load bioinfo-tools Nextflow/` where `VERSION` is e.g. `20.10`). To use, run the pipeline with `-profile uppmax` (one hyphen). This will download and launch the [`uppmax.config`](../conf/uppmax.config) which has been pre-configured with a setup suitable for the UPPMAX servers.