From 51d057564f9fc43248f718a2aff0f710ff3ee8e3 Mon Sep 17 00:00:00 2001 From: "James A. Fellows Yates" Date: Wed, 15 Jun 2022 15:40:42 +0200 Subject: [PATCH] Fix python related seg faults mag@eva --- conf/pipeline/mag/eva.config | 5 +++++ 1 file changed, 5 insertions(+) diff --git a/conf/pipeline/mag/eva.config b/conf/pipeline/mag/eva.config index 81d8d0c..37a531d 100644 --- a/conf/pipeline/mag/eva.config +++ b/conf/pipeline/mag/eva.config @@ -4,6 +4,11 @@ params { config_profile_description = 'nf-core/mag EVA profile provided by nf-core/configs' } +env { + OPENBLAS_NUM_THREADS=1 + OMP_NUM_THREADS=1 +} + process { withName: FASTQC {