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Remove default non-profile bwa parameters from eager profile
I realised today this is dangerous as these would not necessarily be reported if a user doesn't understand the profiles. Therefore removing these so nf-core/eager defaults are always used unless a specific profile (which would be described in the command itself) is explicitly named.
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1 changed files with 1 additions and 5 deletions
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@ -5,11 +5,7 @@ params {
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config_profile_contact = 'James Fellows Yates (@jfy133)'
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config_profile_description = 'nf-core/eager SHH profile provided by nf-core/configs'
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igenomes_base = "/projects1/public_data/igenomes/"
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// default BWA
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bwaalnn = 0.04
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bwaalnl = 32
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}
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}
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// Specific nf-core/eager process configuration
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process {
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