From 56026c5ac4fec88f85eb1e0a44b2ea4e3d053853 Mon Sep 17 00:00:00 2001 From: qlr900 Date: Wed, 6 Jul 2022 09:52:51 +0200 Subject: [PATCH] remove beforeScript --- conf/ku_sund_dangpu.config | 3 +-- 1 file changed, 1 insertion(+), 2 deletions(-) diff --git a/conf/ku_sund_dangpu.config b/conf/ku_sund_dangpu.config index 3f3ab5d..442b8af 100644 --- a/conf/ku_sund_dangpu.config +++ b/conf/ku_sund_dangpu.config @@ -12,8 +12,7 @@ params { } process { - # should we change to a newer java env? - beforeScript = ‘module load jdk/1.8.0_291 singularity/3.8.0’ + executor = ‘slurm’ # uncomment specifically for running mnaseseq pipeline: