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Redo cases for simplification

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This commit is contained in:
Pontus Freyhult 2021-04-12 19:21:58 +02:00
parent be6ea0060f
commit 57c26c13d9
1 changed files with 2 additions and 6 deletions
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8
conf/uppmax.config
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@ -43,19 +43,14 @@ process {
params { params {
save_reference = true save_reference = true
max_memory = 970.GB max_memory = 500.GB
max_cpus = 16 max_cpus = 16
max_time = 240.h max_time = 240.h
// illumina iGenomes reference file paths on UPPMAX // illumina iGenomes reference file paths on UPPMAX
igenomes_base = '/sw/data/uppnex/igenomes/' igenomes_base = '/sw/data/uppnex/igenomes/'
} }
if (hostname ==~ "b.*") {
params.max_memory = 500.GB
}
if (hostname ==~ "s.*") { if (hostname ==~ "s.*") {
params.max_memory = 500.GB
params.max_time = 700.h params.max_time = 700.h
} }
@ -65,6 +60,7 @@ if (hostname ==~ "i.*") {
if (hostname ==~ "r.*") { if (hostname ==~ "r.*") {
params.max_cpus = 20 params.max_cpus = 20
params.max_memory = 970.GB
} }
profiles { profiles {