millironx/nf-configs
1
0
Fork 0
mirror of https://github.com/MillironX/nf-configs.git synced 2024-11-25 17:29:55 +00:00
Code Issues Releases Packages Activity

Merge pull request #153 from FriederikeHanssen/cfc_scratch

Browse source 
Add scratch = true to avoid writing of intermediate file to /tmp
This commit is contained in:
Harshil Patel 2020-05-22 15:48:00 +01:00 committed by GitHub
commit 5981e5ec27
No known key found for this signature in database
GPG key ID: 4AEE18F83AFDEB23
2 changed files with 2 additions and 0 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

1
conf/cfc.config
View file

@ -14,6 +14,7 @@ process {
beforeScript = 'module load devel/singularity/3.4.2' beforeScript = 'module load devel/singularity/3.4.2'
executor = 'slurm' executor = 'slurm'
queue = { task.memory > 60.GB || task.cpus > 20 ? 'qbic' : 'compute' } queue = { task.memory > 60.GB || task.cpus > 20 ? 'qbic' : 'compute' }
scratch = 'true'
} }
weblog{ weblog{

1
conf/cfc_dev.config
View file

@ -13,6 +13,7 @@ process {
beforeScript = 'module load devel/singularity/3.4.2' beforeScript = 'module load devel/singularity/3.4.2'
executor = 'slurm' executor = 'slurm'
queue = { task.memory > 60.GB || task.cpus > 20 ? 'qbic' : 'compute' } queue = { task.memory > 60.GB || task.cpus > 20 ? 'qbic' : 'compute' }
scratch = 'true'
} }
weblog{ weblog{