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update config for MENDEL cluster
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1 changed files with 7 additions and 5 deletions
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@ -2,21 +2,23 @@
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params {
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config_profile_name = 'MENDEL'
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config_profile_description = 'GMI MENDEL cluster profile provided by nf-core/configs'
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config_profile_contact = 'Philipp H (@phue)'
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config_profile_contact = 'Patrick Hüther (@phue)'
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config_profile_url = 'http://www.gmi.oeaw.ac.at/'
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}
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singularity {
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enabled = true
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manifest {
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nextflowVersion = '>=19.01.0'
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}
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process {
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beforeScript = 'module load Singularity'
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executor = 'pbs'
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beforeScript = {'module load Singularity; module load Miniconda3'}
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executor = 'pbspro'
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clusterOptions = { "-P $params.project" }
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}
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params {
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max_cpus = 32
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max_memory = 128.GB
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max_time = 192.h
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igenomesIgnore = true
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}
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