mirror of
https://github.com/MillironX/nf-configs.git
synced 2024-11-22 08:29:54 +00:00
update config for MENDEL cluster
This commit is contained in:
parent
164ae59568
commit
59887d9bc8
1 changed files with 7 additions and 5 deletions
|
@ -2,21 +2,23 @@
|
|||
params {
|
||||
config_profile_name = 'MENDEL'
|
||||
config_profile_description = 'GMI MENDEL cluster profile provided by nf-core/configs'
|
||||
config_profile_contact = 'Philipp H (@phue)'
|
||||
config_profile_contact = 'Patrick Hüther (@phue)'
|
||||
config_profile_url = 'http://www.gmi.oeaw.ac.at/'
|
||||
}
|
||||
|
||||
singularity {
|
||||
enabled = true
|
||||
manifest {
|
||||
nextflowVersion = '>=19.01.0'
|
||||
}
|
||||
|
||||
process {
|
||||
beforeScript = 'module load Singularity'
|
||||
executor = 'pbs'
|
||||
beforeScript = {'module load Singularity; module load Miniconda3'}
|
||||
executor = 'pbspro'
|
||||
clusterOptions = { "-P $params.project" }
|
||||
}
|
||||
|
||||
params {
|
||||
max_cpus = 32
|
||||
max_memory = 128.GB
|
||||
max_time = 192.h
|
||||
igenomesIgnore = true
|
||||
}
|
||||
|
|
Loading…
Reference in a new issue