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Merge pull request #275 from jfy133/eva-eager-subprofiles

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Bump lib merge further eager@EVA
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Maxime Borry 2021-09-09 14:52:05 +02:00 committed by GitHub
commit 5a739c0c8b
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1 changed files with 2 additions and 1 deletions
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conf/pipeline/eager/eva.config
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@ -385,7 +385,7 @@ profiles {
withName: library_merge { withName: library_merge {
clusterOptions = { "-S /bin/bash -V -l h_vmem=${(task.memory.toGiga() * 6)}G,virtual_free=${(task.memory.toGiga() * 6)}G" } clusterOptions = { "-S /bin/bash -V -l h_vmem=${(task.memory.toGiga() * 6)}G,virtual_free=${(task.memory.toGiga() * 6)}G" }
memory = { check_max( 4.GB * task.attempt, 'memory' ) } memory = { check_max( 6.GB * task.attempt, 'memory' ) }
} }
withName: seqtype_merge { withName: seqtype_merge {
@ -394,6 +394,7 @@ profiles {
withName: additional_library_merge { withName: additional_library_merge {
clusterOptions = { "-S /bin/bash -V -l h_vmem=${(task.memory.toGiga() * 6)}G,virtual_free=${(task.memory.toGiga() * 6)}G" } clusterOptions = { "-S /bin/bash -V -l h_vmem=${(task.memory.toGiga() * 6)}G,virtual_free=${(task.memory.toGiga() * 6)}G" }
memory = { check_max( 6.GB * task.attempt, 'memory' ) }
} }
withName:hostremoval_input_fastq { withName:hostremoval_input_fastq {