diff --git a/conf/pipeline/taxprofiler/hasta.config b/conf/pipeline/taxprofiler/hasta.config new file mode 100644 index 0000000..fcf7b7d --- /dev/null +++ b/conf/pipeline/taxprofiler/hasta.config @@ -0,0 +1,10 @@ +process { + + withName:'BBMAP_BBDUK' { + memory = { check_max( 80.GB * task.attempt, 'memory' ) } + } + + withName: 'MALT_RUN' { + memory = { check_max( 80.GB * task.attempt, 'memory' ) } + } +} diff --git a/pipeline/taxprofiler.config b/pipeline/taxprofiler.config new file mode 100644 index 0000000..be9f02b --- /dev/null +++ b/pipeline/taxprofiler.config @@ -0,0 +1,13 @@ +/* + * ------------------------------------------------- + * nfcore/taxprofiler custom profile Nextflow config file + * ------------------------------------------------- + * Config options for custom environments. + * Cluster-specific config options should be saved + * in the conf/pipeline/taxprofiler folder and imported + * under a profile name here. + */ + +profiles { + hasta { includeConfig "${params.custom_config_base}/conf/pipeline/taxprofiler/hasta.config" } +}