From 60c66d93aca43d7ae3473ff182c9a83e087695cc Mon Sep 17 00:00:00 2001 From: James Fellows Yates Date: Tue, 6 Apr 2021 17:53:27 +0200 Subject: [PATCH] Markdown linting --- docs/eva.md | 2 +- docs/pipeline/eager/eva.md | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/docs/eva.md b/docs/eva.md index 9b83222..24a964c 100644 --- a/docs/eva.md +++ b/docs/eva.md @@ -25,4 +25,4 @@ Note the following characteristics of this profile: ### debug -This simple profile just turns off automatic clean up of intermediate files. This can be useful for debugging. Specify e.g. with `-profile eva,archgen` \ No newline at end of file +This simple profile just turns off automatic clean up of intermediate files. This can be useful for debugging. Specify e.g. with `-profile eva,archgen`. diff --git a/docs/pipeline/eager/eva.md b/docs/pipeline/eager/eva.md index 71f4a2e..a8dc563 100644 --- a/docs/pipeline/eager/eva.md +++ b/docs/pipeline/eager/eva.md @@ -31,4 +31,4 @@ Specific configurations for eva has been made for eager. #### Pathogen - `pathogen_loose`: optimised for mapping of human aDNA reads (i.e. bwa aln defaults as `-l 16 -n 0.01`) -- `pathogen_strict`: optimised for mapping of human aDNA reads (i.e. bwa aln defaults as `-l 32, -n 0.1`) \ No newline at end of file +- `pathogen_strict`: optimised for mapping of human aDNA reads (i.e. bwa aln defaults as `-l 32, -n 0.1`)