From d09f5fc11614f10af780638b3da0f42cca7ef158 Mon Sep 17 00:00:00 2001
From: "Thiseas C. Lamnidis" <thisseass@gmail.com>
Date: Fri, 6 May 2022 15:12:04 +0200
Subject: [PATCH] Update eva.config

eigenstrat_snp_coverage also loads pandas
---
 conf/pipeline/eager/eva.config | 4 ++++
 1 file changed, 4 insertions(+)

diff --git a/conf/pipeline/eager/eva.config b/conf/pipeline/eager/eva.config
index 907d1df..f35f1ed 100644
--- a/conf/pipeline/eager/eva.config
+++ b/conf/pipeline/eager/eva.config
@@ -197,6 +197,10 @@ process {
     errorStrategy = { task.exitStatus in [1,143,137,104,134,139,140] ? 'retry' : 'finish' }
   }
   
+  withName:eigenstrat_snp_coverage {
+    beforeScript = 'export OPENBLAS_NUM_THREADS=1; export OMP_NUM_THREADS=1'
+  }  
+  
   withName:kraken_merge {
     beforeScript = 'export OPENBLAS_NUM_THREADS=1; export OMP_NUM_THREADS=1'
   }