From 6834f020cb45fdfb1f4bcf181ced275830b4fbb7 Mon Sep 17 00:00:00 2001 From: Harshil Patel Date: Thu, 9 Apr 2020 17:49:15 +0100 Subject: [PATCH] Update viralrecon.config --- pipeline/viralrecon.config | 8 ++++++-- 1 file changed, 6 insertions(+), 2 deletions(-) diff --git a/pipeline/viralrecon.config b/pipeline/viralrecon.config index 45c8247..d889460 100644 --- a/pipeline/viralrecon.config +++ b/pipeline/viralrecon.config @@ -9,8 +9,12 @@ params { // Genome reference file paths genomes { 'NC_045512.2' { - fasta = "https://raw.githubusercontent.com/nf-core/test-datasets/viralrecon/genome/NC_045512.2/NC_045512.2.fasta.gz" - gff = "https://raw.githubusercontent.com/nf-core/test-datasets/viralrecon/genome/NC_045512.2/NC_045512.2.gff.gz" + fasta = "https://raw.githubusercontent.com/nf-core/test-datasets/viralrecon/genome/NC_045512.2/GCF_009858895.2_ASM985889v3_genomic.200409.fna.gz" + gff = "https://raw.githubusercontent.com/nf-core/test-datasets/viralrecon/genome/NC_045512.2/GCF_009858895.2_ASM985889v3_genomic.200409.gff.gz" + } + 'MN908947.3' { + fasta = "https://raw.githubusercontent.com/nf-core/test-datasets/viralrecon/genome/MN908947.3/GCA_009858895.3_ASM985889v3_genomic.200409.fna.gz" + gff = "https://raw.githubusercontent.com/nf-core/test-datasets/viralrecon/genome/MN908947.3/GCA_009858895.3_ASM985889v3_genomic.200409.gff.gz" } } }