millironx/nf-configs
1
0
Fork 0
mirror of https://github.com/MillironX/nf-configs.git synced 2024-11-21 16:16:04 +00:00
Code Issues Releases Packages Activity

Merge pull request #148 from MaxUlysse/viralrecon

Browse source 
add viralrecon specific config
This commit is contained in:
Harshil Patel 2020-04-09 13:34:23 +01:00 committed by GitHub
commit 6adc7342e9
No known key found for this signature in database
GPG key ID: 4AEE18F83AFDEB23
1 changed files with 16 additions and 0 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

16
pipeline/viralrecon.config Normal file
View file

@ -0,0 +1,16 @@
/*
* -------------------------------------------------
* nfcore/viralrecon custom profile Nextflow config file
* -------------------------------------------------
* Defines viral reference genomes for all environments.
*/
params {
// Genome reference file paths
genomes {
'NC_045512.2' {
fasta = "https://raw.githubusercontent.com/nf-core/test-datasets/viralrecon/genome/NC_045512.2/NC_045512.2.fasta.gz"
gff = "https://raw.githubusercontent.com/nf-core/test-datasets/viralrecon/genome/NC_045512.2/NC_045512.2.gff.gz"
}
}
}