From 6d14461adcc94c066357f3794cc5bb65cae88c85 Mon Sep 17 00:00:00 2001 From: Phil Ewels Date: Mon, 7 Jan 2019 12:11:02 +0100 Subject: [PATCH] Update docs/template.md Co-Authored-By: apeltzer --- docs/template.md | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/docs/template.md b/docs/template.md index bd65ee1..7efd0a7 100644 --- a/docs/template.md +++ b/docs/template.md @@ -17,7 +17,8 @@ module load Singularity/2.6.0 ## Below are non-mandatory information on iGenomes specific configuration -A local copy of the iGenomes resource has been made available on PROFILE CLUSTER so you should be able to run the pipeline against any reference available in the `igenomes.config` specific to the nf-core pipeline. You can do this by simply using the `--genome ` parameter. Some of the more exotic genomes may not have been downloaded onto PROFILE CLUSTER so have a look in the `igenomes_base` path specified in [`profile.config`](../conf/profile.config). +A local copy of the iGenomes resource has been made available on PROFILE CLUSTER so you should be able to run the pipeline against any reference available in the `igenomes.config` specific to the nf-core pipeline. +You can do this by simply using the `--genome ` parameter. >NB: You will need an account to use the HPC cluster on PROFILE CLUSTER in order to run the pipeline. If in doubt contact IT.