diff --git a/conf/pipeline/atacseq/eddie.config b/conf/pipeline/atacseq/eddie.config new file mode 100644 index 0000000..5e2b96b --- /dev/null +++ b/conf/pipeline/atacseq/eddie.config @@ -0,0 +1,14 @@ +process { + withName : "FASTQC" { + clusterOptions = {"-l h_vmem=${(task.memory + 4.GB).bytes/task.cpus}"} + } + withName : "MERGED_LIB_BAM" { + clusterOptions = {"-l h_vmem=${(task.memory + 4.GB).bytes/task.cpus}"} + } + withName : "MERGED_LIB_PICARD_METRICS" { + clusterOptions = {"-l h_vmem=${(task.memory + 4.GB).bytes/task.cpus}"} + } + withName : "MERGED_REP_BAM" { + clusterOptions = {"-l h_vmem=${(task.memory + 4.GB).bytes/task.cpus}"} + } +}