From 7112e74b73303cdbdd8decdeb5ffc2c3572918fe Mon Sep 17 00:00:00 2001 From: James Fellows Yates Date: Thu, 3 Mar 2022 13:43:40 +0100 Subject: [PATCH] Tweak settings based on latest batch specs --- conf/mpcdf.config | 4 ++-- docs/mpcdf.md | 12 ++++++------ 2 files changed, 8 insertions(+), 8 deletions(-) diff --git a/conf/mpcdf.config b/conf/mpcdf.config index 281e7bf..88617d6 100644 --- a/conf/mpcdf.config +++ b/conf/mpcdf.config @@ -32,7 +32,7 @@ profiles { params { config_profile_description = 'MPCDF cobra profile (unofficially) provided by nf-core/configs.' max_memory = 725.GB - max_cpus = 80 + max_cpus = 40 max_time = 24.h } } @@ -61,7 +61,7 @@ profiles { params { config_profile_description = 'MPCDF raven profile (unofficially) provided by nf-core/configs.' - max_memory = 368.GB + max_memory = 2000000.MB max_cpus = 72 max_time = 24.h } diff --git a/docs/mpcdf.md b/docs/mpcdf.md index 5aa7ad2..f1b1a4b 100644 --- a/docs/mpcdf.md +++ b/docs/mpcdf.md @@ -16,24 +16,24 @@ All profiles use `singularity` as the corresponding containerEngine. To prevent ### cobra -To use: `-profile cobra,mpcdf` +To use: `-profile mpcdf,cobra` Sets the following parameters: - Maximum parallel running jobs: 8 -- Max. memory: 750.GB -- Max. CPUs: 80 +- Max. memory: 725.GB +- Max. CPUs: 40 - Max. walltime: 24.h ### raven -To use: `-profile raven,mpcdf` +To use: `-profile mpcdf,raven` Sets the following parameters: - Maximum parallel running jobs: 8 -- Max. memory: 368.GB -- Max. CPUs: 192 +- Max. memory: 200000.MB (2.TB) +- Max. CPUs: 72 - Max. walltime: 24.h ## Pipeline Profiles