From 71bc98afaef852562d5664d7861cc31cb870db79 Mon Sep 17 00:00:00 2001 From: marchoeppner Date: Mon, 29 Jul 2019 12:06:29 +0200 Subject: [PATCH] Adding config file for CCGA dx cluster --- docs/ccga_dx.md | 9 +++++++++ 1 file changed, 9 insertions(+) create mode 100644 docs/ccga_dx.md diff --git a/docs/ccga_dx.md b/docs/ccga_dx.md new file mode 100644 index 0000000..62bf29c --- /dev/null +++ b/docs/ccga_dx.md @@ -0,0 +1,9 @@ +# nf-core/configs: CCGA DX Configuration + +Deployment and testing of nf-core pipelines at the CCGA DX cluster is on-going. + +To use, run the pipeline with `-profile ccga_dx`. This will download and launch the [`ccga.config`](../conf/ccga.config) which has been pre-configured with a setup suitable for the CCGA cluster. Using this profile, a docker image containing all of the required software will be downloaded, and converted to a Singularity image before execution of the pipeline. + +Before running the pipeline you will need to have Nextflow installed. + +>NB: Access to the CCGA DX cluster is restricted to IKMB/CCGA employes. Please talk to Marc Hoeppner to get access (@marchoeppner).