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Merge pull request #123 from ewels/params-overwrite

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Remove params.custom_config_base from nf-core/configs
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Phil Ewels 2020-02-27 12:23:04 +01:00 committed by GitHub
commit 752a83b4c7
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1 changed files with 2 additions and 5 deletions
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7
nfcore_custom.config
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@ -8,9 +8,6 @@
* name here. * name here.
*/ */
params.custom_config_version = 'master'
params.custom_config_base = "https://raw.githubusercontent.com/nf-core/configs/${params.custom_config_version}"
//Please use a new line per include Config section to allow easier linting/parsing. Thank you. //Please use a new line per include Config section to allow easier linting/parsing. Thank you.
profiles { profiles {
awsbatch { includeConfig "${params.custom_config_base}/conf/awsbatch.config" } awsbatch { includeConfig "${params.custom_config_base}/conf/awsbatch.config" }
@ -23,8 +20,8 @@ profiles {
cfc { includeConfig "${params.custom_config_base}/conf/cfc.config" } cfc { includeConfig "${params.custom_config_base}/conf/cfc.config" }
crick { includeConfig "${params.custom_config_base}/conf/crick.config" } crick { includeConfig "${params.custom_config_base}/conf/crick.config" }
czbiohub_aws { includeConfig "${params.custom_config_base}/conf/czbiohub_aws.config" } czbiohub_aws { includeConfig "${params.custom_config_base}/conf/czbiohub_aws.config" }
czbiohub_aws_highpriority { czbiohub_aws_highpriority {
includeConfig "${params.custom_config_base}/conf/czbiohub_aws.config"; includeConfig "${params.custom_config_base}/conf/czbiohub_aws.config";
includeConfig "${params.custom_config_base}/conf/czbiohub_aws_highpriority.config"} includeConfig "${params.custom_config_base}/conf/czbiohub_aws_highpriority.config"}
genotoul { includeConfig "${params.custom_config_base}/conf/genotoul.config" } genotoul { includeConfig "${params.custom_config_base}/conf/genotoul.config" }
denbi_qbic { includeConfig "${params.custom_config_base}/conf/denbi_qbic.config" } denbi_qbic { includeConfig "${params.custom_config_base}/conf/denbi_qbic.config" }