diff --git a/conf/shh.config b/conf/shh.config index c23d331..14da627 100644 --- a/conf/shh.config +++ b/conf/shh.config @@ -14,14 +14,7 @@ singularity { process { executor = 'slurm' - switch(task.time){ - case {it < 2.h}: - queue = 'short' - case {it > 2.h && it < 48.h}: - queue = 'medium' - case {it > 48.h}: - queue = 'long' - } + queue = { task.memory > 756.GB ? 'supercruncher': task.time <= 2.h ? 'short' : task.time <= 48.h ? 'medium': 'long' } } executor { @@ -29,9 +22,9 @@ executor { } params { - max_memory = 256.GB + max_memory = 2.TB max_cpus = 32 - max_time = 2.h + max_time = 720.h //Illumina iGenomes reference file path igenomes_base = "/projects1/public_data/igenomes/" } \ No newline at end of file