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Condensed base params and added names for debugging

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James A. Fellows Yates 2020-05-12 12:47:25 +02:00 committed by GitHub
parent 4814bac1c3
commit 8225e07819
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1 changed files with 8 additions and 11 deletions
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19
conf/shh.config
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@ -1,8 +1,13 @@
//Profile config names for nf-core/configs //Profile config names for nf-core/configs
params { params {
config_profile_description = 'Generic MPI-SHH cluster(s) profile provided by nf-core/configs.' config_profile_description = 'JFY Generic MPI-SHH cluster(s) profile provided by nf-core/configs.'
config_profile_contact = 'James Fellows Yates (@jfy133), Maxime Borry (@Maxibor)' config_profile_contact = 'James Fellows Yates (@jfy133), Maxime Borry (@Maxibor)'
config_profile_url = 'https://shh.mpg.de' config_profile_url = 'https://shh.mpg.de'
max_memory = 256.GB
max_cpus = 32
max_time = 720.h
//Illumina iGenomes reference file path
igenomes_base = "/projects1/public_data/igenomes/"
} }
cleanup = true cleanup = true
@ -23,23 +28,15 @@ executor {
queueSize = 16 queueSize = 16
} }
params {
max_memory = 256.GB
max_cpus = 32
max_time = 720.h
//Illumina iGenomes reference file path
igenomes_base = "/projects1/public_data/igenomes/"
}
profiles { profiles {
cdag { cdag {
params { params {
config_profile_description = 'MPI-SHH CDAG profile, provided by nf-core/configs.' config_profile_description = 'JFY MPI-SHH CDAG profile, provided by nf-core/configs.'
} }
} }
sdag { sdag {
params { params {
config_profile_description = 'MPI-SHH SDAG profile, provided by nf-core/configs.' config_profile_description = 'JFY MPI-SHH SDAG profile, provided by nf-core/configs.'
max_memory = 2.TB max_memory = 2.TB
max_cpus = 128 max_cpus = 128
} }