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conf/nihbiowulf.config

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+//Profile config names for nf-core/configs
+params {
+  config_profile_description = 'National Institutes of Health, USA: Biowulf nf-core config'
+  config_profile_contact = 'Kevin Brick (@kevbrick)'
+  config_profile_url = 'https://hpc.nih.gov/apps/nextflow.html'
+  max_memory = 224.GB	
+  max_cpus = 32
+  max_time = 72.h
+
+  igenomes_base = '/fdb/igenomes/'
+}
+
+process {
+  scratch = '/lscratch/$SLURM_JOBID'
+  maxForks = 100
+}
+
+profiles {
+  local {
+    process.executor = 'local'
+  }
+  
+  slurm {
+    process.executor = 'slurm'
+    executor.$slurm.pollInterval = '1 min'
+    executor.$slurm.queueStatInterval = '5 min'
+    executor.queueSize = 100
+    executor.$slurm.submitRateLimit = '6/1min'
+    process.clusterOptions = ' --gres=lscratch:600 --signal USR2@20'
+  }
+}
+	
+singularity {
+  enabled = true
+  autoMounts = true
+  envWhitelist='https_proxy,http_proxy,ftp_proxy,DISPLAY,SLURM_JOBID'
+  runOptions = ' -B /lscratch -B /fdb/igenomes/ --env TMPDIR="/lscratch/$SLURM_JOBID" '
+}