diff --git a/conf/pipeline/viralrecon/genomes.config b/conf/pipeline/viralrecon/genomes.config
index 0d5e754..ce2cf72 100644
--- a/conf/pipeline/viralrecon/genomes.config
+++ b/conf/pipeline/viralrecon/genomes.config
@@ -8,6 +8,8 @@
 params {
   // Genome reference file paths
   genomes {
+
+    // SARS-CoV-2
     'NC_045512.2' {
       // This version of the reference has been kept here for backwards compatibility.
       // Please use 'MN908947.3' if possible because all primer sets are available / have been pre-prepared relative to that assembly
@@ -18,6 +20,8 @@ params {
       nextclade_dataset_reference = 'MN908947'
       nextclade_dataset_tag       = '2022-06-14T12:00:00Z'
     }
+
+    // SARS-CoV-2
     'MN908947.3' {
       fasta            = 'https://github.com/nf-core/test-datasets/raw/viralrecon/genome/MN908947.3/GCA_009858895.3_ASM985889v3_genomic.200409.fna.gz'
       gff              = 'https://github.com/nf-core/test-datasets/raw/viralrecon/genome/MN908947.3/GCA_009858895.3_ASM985889v3_genomic.200409.gff.gz'
@@ -66,5 +70,24 @@ params {
         }
       }
     }
+
+    // Monkeypox
+    'NC_063383.1' {
+      fasta            = 'https://github.com/nf-core/test-datasets/raw/viralrecon/genome/NC_063383.1/GCA_014621545.1_ASM1462154v1_genomic.220824.fna.gz'
+      gff              = 'https://github.com/nf-core/test-datasets/raw/viralrecon/genome/NC_063383.1/GCA_014621545.1_ASM1462154v1_genomic.220824.gff.gz'
+    }
+
+    // Monkeypox
+    'ON563414.3' {
+      fasta            = 'https://github.com/nf-core/test-datasets/raw/viralrecon/genome/ON563414.3/GCA_023516015.3_ASM2351601v1_genomic.220824.fna.gz'
+      gff              = 'https://github.com/nf-core/test-datasets/raw/viralrecon/genome/ON563414.3/GCA_023516015.3_ASM2351601v1_genomic.220824.gff.gz'
+    }
+
+    // Monkeypox
+    'MT903344.1' {
+      fasta            = 'https://github.com/nf-core/test-datasets/raw/viralrecon/genome/MT903344.1/GCA_014621585.1_ASM1462158v1_genomic.220824.fna.gz'
+      gff              = 'https://github.com/nf-core/test-datasets/raw/viralrecon/genome/MT903344.1/GCA_014621585.1_ASM1462158v1_genomic.220824.gff.gz'
+    }
+
   }
 }