From 8e42bbd7d055acae8fff3ed8fca372979a96adfa Mon Sep 17 00:00:00 2001 From: mseybold Date: Fri, 6 Mar 2020 10:25:08 +0100 Subject: [PATCH] Update cfc.config We just added some new HighMem nodes to the cfc, Partition/queue name is qbic, each node has 128Cores and 2TB of RAM. The old queue (Name compute) is set to default by slurm. Each process over 60GB of RAM or over 20cpus should run on those new nodes. So added the queue State and adjusted the max_memory and max_cpu setting. --- conf/cfc.config | 5 +++-- 1 file changed, 3 insertions(+), 2 deletions(-) diff --git a/conf/cfc.config b/conf/cfc.config index 763dcf0..99917ba 100644 --- a/conf/cfc.config +++ b/conf/cfc.config @@ -13,6 +13,7 @@ singularity { process { beforeScript = 'module load devel/singularity/3.4.2' executor = 'slurm' + queue = { task.memory > 60.GB || task.cpus > 20 ? 'qbic' } } weblog{ @@ -22,7 +23,7 @@ weblog{ params { igenomes_base = '/nfsmounts/igenomes' - max_memory = 498.GB - max_cpus = 20 + max_memory = 1999.GB + max_cpus = 128 max_time = 140.h }