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add default trimming
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@ -61,6 +61,8 @@ params {
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fc_group_features = 'gene_id'
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fc_group_features = 'gene_id'
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fc_group_features_type = 'gene_type'
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fc_group_features_type = 'gene_type'
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trim_pattern = '_+S\\d+'
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// GENCODE GTF and fasta files
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// GENCODE GTF and fasta files
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genomes {
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genomes {
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'GRCh38' {
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'GRCh38' {
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