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Merge pull request #253 from jfy133/eva
eager@EVA fixes more SGE + java silliness
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commit
9298b353f5
1 changed files with 2 additions and 2 deletions
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@ -69,7 +69,7 @@ process {
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}
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withName: adapter_removal {
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clusterOptions = { "-S /bin/bash -l h_vmem=${(task.memory.toGiga() * 2)}G,virtual_free=${(task.memory.toGiga() * 2)}G" }
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clusterOptions = { "-S /bin/bash -l h_vmem=${(task.memory.toGiga() * 4)}G,virtual_free=${(task.memory.toGiga() * 4)}G" }
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}
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withName: dedup {
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@ -97,7 +97,7 @@ process {
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}
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withName: mtnucratio {
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clusterOptions = { "-S /bin/bash -l h_vmem=${(task.memory.toGiga() * 2)}G,virtual_free=${(task.memory.toGiga() * 2)}G" }
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clusterOptions = { "-S /bin/bash -l h_vmem=${(task.memory.toGiga() * 4)}G,virtual_free=${(task.memory.toGiga() * 4)}G" }
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}
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withName: vcf2genome {
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