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Merge pull request #272 from jfy133/eva-eager-subprofiles

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Bump additional library merge memory for eager @ EVA
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James A. Fellows Yates 2021-09-08 15:25:07 +02:00 committed by GitHub
commit 96e26a5411
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conf/pipeline/eager/eva.config
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@ -90,6 +90,7 @@ process {
withName: additional_library_merge { withName: additional_library_merge {
clusterOptions = { "-S /bin/bash -V -l h_vmem=${(task.memory.toGiga() * 2)}G,virtual_free=${(task.memory.toGiga() * 2)}G" } clusterOptions = { "-S /bin/bash -V -l h_vmem=${(task.memory.toGiga() * 2)}G,virtual_free=${(task.memory.toGiga() * 2)}G" }
memory = { check_max( 4.GB * task.attempt, 'memory' ) }
} }
withName: malt { withName: malt {
@ -238,6 +239,7 @@ profiles {
withName: additional_library_merge { withName: additional_library_merge {
clusterOptions = { "-S /bin/bash -V -l h_vmem=${(task.memory.toGiga() * 3)}G,virtual_free=${(task.memory.toGiga() * 3)}G" } clusterOptions = { "-S /bin/bash -V -l h_vmem=${(task.memory.toGiga() * 3)}G,virtual_free=${(task.memory.toGiga() * 3)}G" }
memory = { check_max( 4.GB * task.attempt, 'memory' ) }
} }
withName: malt { withName: malt {
@ -383,6 +385,7 @@ profiles {
withName: library_merge { withName: library_merge {
clusterOptions = { "-S /bin/bash -V -l h_vmem=${(task.memory.toGiga() * 6)}G,virtual_free=${(task.memory.toGiga() * 6)}G" } clusterOptions = { "-S /bin/bash -V -l h_vmem=${(task.memory.toGiga() * 6)}G,virtual_free=${(task.memory.toGiga() * 6)}G" }
memory = { check_max( 4.GB * task.attempt, 'memory' ) }
} }
withName: seqtype_merge { withName: seqtype_merge {