From 9792226f5cecebf400205d435461ab3d047bed50 Mon Sep 17 00:00:00 2001 From: Harshil Patel Date: Thu, 27 Jan 2022 12:45:41 +0000 Subject: [PATCH] Update genomes.config --- conf/pipeline/viralrecon/genomes.config | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/conf/pipeline/viralrecon/genomes.config b/conf/pipeline/viralrecon/genomes.config index 9cf864a..8682942 100644 --- a/conf/pipeline/viralrecon/genomes.config +++ b/conf/pipeline/viralrecon/genomes.config @@ -13,18 +13,18 @@ params { // Please use 'MN908947.3' if possible because all primer sets are available / have been pre-prepared relative to that assembly fasta = 'https://github.com/nf-core/test-datasets/raw/viralrecon/genome/NC_045512.2/GCF_009858895.2_ASM985889v3_genomic.200409.fna.gz' gff = 'https://github.com/nf-core/test-datasets/raw/viralrecon/genome/NC_045512.2/GCF_009858895.2_ASM985889v3_genomic.200409.gff.gz' - nextclade_dataset = 'https://github.com/nf-core/test-datasets/raw/viralrecon/genome/MN908947.3/nextclade_sars-cov-2_MN908947_2022-01-05T19_54_31Z.tar.gz' + nextclade_dataset = 'https://github.com/nf-core/test-datasets/raw/viralrecon/genome/MN908947.3/nextclade_sars-cov-2_MN908947_2022-01-18T12_00_00Z.tar.gz' nextclade_dataset_name = 'sars-cov-2' nextclade_dataset_reference = 'MN908947' - nextclade_dataset_tag = '2022-01-05T19:54:31Z' + nextclade_dataset_tag = '2022-01-18T12:00:00Z' } 'MN908947.3' { fasta = 'https://github.com/nf-core/test-datasets/raw/viralrecon/genome/MN908947.3/GCA_009858895.3_ASM985889v3_genomic.200409.fna.gz' gff = 'https://github.com/nf-core/test-datasets/raw/viralrecon/genome/MN908947.3/GCA_009858895.3_ASM985889v3_genomic.200409.gff.gz' - nextclade_dataset = 'https://github.com/nf-core/test-datasets/raw/viralrecon/genome/MN908947.3/nextclade_sars-cov-2_MN908947_2022-01-05T19_54_31Z.tar.gz' + nextclade_dataset = 'https://github.com/nf-core/test-datasets/raw/viralrecon/genome/MN908947.3/nextclade_sars-cov-2_MN908947_2022-01-18T12_00_00Z.tar.gz' nextclade_dataset_name = 'sars-cov-2' nextclade_dataset_reference = 'MN908947' - nextclade_dataset_tag = '2022-01-05T19:54:31Z' + nextclade_dataset_tag = '2022-01-18T12:00:00Z' primer_sets { artic { '1' {